WebSep 7, 2024 · An RTM-GWAS procedure reveals the QTL alleles and candidate genes for three yield-related traits in upland cotton Authors Junji Su 1 , Caixiang Wang 2 , Qi Ma 3 , … Web限制性两阶段多位点全基因组关联分析方法(rtm-gwas)是新建立的一种可以全面检测自然群体和双(多)亲衍生群体中具有不同复等位变异qtl体系的关联分析方法.本文介绍了提出rtm …
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WebJan 12, 2024 · Be protected from cyber breaches with Dell Cyber Recovery solutions. With over 560,000 new pieces of malware detected every day, it’s important to be prepared. Dell Data Protection for Azure from Dell Technologies has end-to-end integrated storage, data protection and cyber resiliency solutions for edge, core, and multi-cloud environments ... WebTo solve this issue, multi-locus GWAS methods have been recommended. However, only a few software packages for multi-locus GWAS are available. Therefore, we developed an R software named mrMLM v4.0.2. This software integrates mrMLM, FASTmrMLM, FASTmrEMMA, pLARmEB, pKWmEB, and ISIS EM-BLASSO methods developed by our lab. farhat associates
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WebJun 3, 2024 · Figure 1. Manhattan figures of the two bi-phenotypic traits obtained from χ 2 association analysis and RTM-GWAS procedure. (A) Manhattan map of pubescence color by χ 2 association analysis. (B) Manhattan map of flower color by χ 2 association analysis. (C) Manhattan map of pubescence color by RTM-GWAS. The p-values of association test in … WebDec 5, 2024 · In the RTM-GWAS procedure, the tightly linked SNPs are grouped into SNP linkage disequilibrium blocks (SNPLDBs) to form genomic markers with multiple haplotypes as alleles, and then it utilizes two-stage association analysis based on a multi-locus multi-allele model for genome-wide QTL identification along with their multiple alleles. WebFrom the QTLs, 44 DTF and 36 DTM candidate genes were annotated and grouped respectively into nine biological processes, indicating multi-functional DTF/DTM genes are involved in a complex gene network. In summary, we identified QTL-alleles relatively thoroughly using RTM-GWAS for direct matrix comparisons and subsequent analysis. farhat bakery